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parp12a poly (ADP-ribose) polymerase family, member 12a [ Esox lucius (northern pike) ]

Gene ID: 105018136, updated on 18-Sep-2024

Summary

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Gene symbol
parp12a
Gene description
poly (ADP-ribose) polymerase family, member 12a
See related
Ensembl:ENSELUG00000019421
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
parp12
Orthologs
human zebrafish all
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Genomic context

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See parp12a in Genome Data Viewer
Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 19 NC_047587.1 (5391074..5412176)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG19 NC_025986.4 (5522403..5543585)

Chromosome 19 - NC_047587.1Genomic Context describing neighboring genes Neighboring gene ribitol xylosyltransferase 1 Neighboring gene SLIT-ROBO Rho GTPase activating protein 1a Neighboring gene thromboxane A synthase 1 (platelet) Neighboring gene homeodomain interacting protein kinase 2 Neighboring gene UPF0606 protein KIAA1549

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein mono-ADP-ribosyltransferase PARP12
Names
poly(ADP-ribose) polymerase family member 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047587.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    5391074..5412176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010883335.4 → XP_010881637.2  protein mono-ADP-ribosyltransferase PARP12 isoform X1

    UniProtKB/TrEMBL
    A0A3P8YUC5
    Related
    ENSELUP00000020156.2, ENSELUT00000030499.3
    Conserved Domains (3) summary
    cd01439
    Location:556 → 671
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    pfam02825
    Location:372 → 443
    WWE; WWE domain
    pfam18345
    Location:95 → 113
    zf_CCCH_4; Zinc finger domain

  2. XM_020056801.2 → XP_019912360.2  protein mono-ADP-ribosyltransferase PARP12 isoform X2

    UniProtKB/TrEMBL
    A0A3P8YUC5
    Conserved Domains (3) summary
    cd01439
    Location:555 → 670
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    pfam02825
    Location:371 → 442
    WWE; WWE domain
    pfam18345
    Location:95 → 113
    zf_CCCH_4; Zinc finger domain
Nucleotide Protein
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