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rab7a RAB7a, member RAS oncogene family [ Esox lucius (northern pike) ]

Gene ID: 105017315, updated on 18-Jun-2024

Summary

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Gene symbol
rab7a
Gene description
RAB7a, member RAS oncogene family
See related
Ensembl:ENSELUG00000016682
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See rab7a in Genome Data Viewer
Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 17 NC_047585.1 (19223485..19230007, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG17 NC_025984.4 (29447490..29454219)

Chromosome 17 - NC_047585.1Genomic Context describing neighboring genes Neighboring gene transcriptional adaptor 3 (NGG1 homolog, yeast)-like Neighboring gene 5-hydroxymethylcytosine binding, ES cell specific Neighboring gene ribophorin I Neighboring gene uncharacterized LOC109616824 Neighboring gene GATA binding protein 2a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagosome-lysosome fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-7a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047585.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    19223485..19230007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010881821.3 → XP_010880123.1  ras-related protein Rab-7a

    See identical proteins and their annotated locations for XP_010880123.1

    UniProtKB/TrEMBL
    A0A3P8ZLM8, A0A6Q2Z7V0
    Related
    ENSELUP00000096310.1, ENSELUT00000097920.1
    Conserved Domains (1) summary
    cd01862
    Location:9 → 179
    Rab7; Rab GTPase family 7 (Rab7)

  2. XM_010881822.3 → XP_010880124.1  ras-related protein Rab-7a

    See identical proteins and their annotated locations for XP_010880124.1

    UniProtKB/TrEMBL
    A0A3P8ZLM8, A0A6Q2Z7V0
    Related
    ENSELUP00000016928.2, ENSELUT00000026403.3
    Conserved Domains (1) summary
    cd01862
    Location:9 → 179
    Rab7; Rab GTPase family 7 (Rab7)
Nucleotide Protein
Heading Accession and Version

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