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sap18 Sin3A-associated protein [ Esox lucius (northern pike) ]

Gene ID: 105016423, updated on 18-Jun-2024

Summary

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Gene symbol
sap18
Gene description
Sin3A-associated protein
See related
Ensembl:ENSELUG00000006342
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See sap18 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 16 NC_047584.1 (25252438..25255168)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG16 NC_025983.4 (9468670..9471369, complement)

Chromosome 16 - NC_047584.1Genomic Context describing neighboring genes Neighboring gene large tumor suppressor kinase 2 Neighboring gene uncharacterized LOC105016424 Neighboring gene spindle and kinetochore associated complex subunit 3 Neighboring gene uncharacterized LOC105016427 Neighboring gene hyperpolarization activated cyclic nucleotide-gated potassium channel 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP18
Names
Sin3A associated protein 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047584.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    25252438..25255168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010880248.4 → XP_010878550.1  histone deacetylase complex subunit SAP18

    UniProtKB/TrEMBL
    A0A3P8ZLS4
    Related
    ENSELUP00000029408.2, ENSELUT00000010903.3
    Conserved Domains (1) summary
    pfam06487
    Location:24 → 137
    SAP18; Sin3 associated polypeptide p18 (SAP18)
Nucleotide Protein
Heading Accession and Version

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