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parp14rs3 poly(ADP-ribose) polymerase family member 14-related sequence 3 [ Esox lucius (northern pike) ]

Gene ID: 105016237, updated on 18-Sep-2024

Summary

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Gene symbol
parp14rs3
Gene description
poly(ADP-ribose) polymerase family member 14-related sequence 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
zebrafish all
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Genomic context

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See parp14rs3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
26
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 16 NC_047584.1 (13827717..13843122, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG16 NC_025983.4 (20936827..20952160)

Chromosome 16 - NC_047584.1Genomic Context describing neighboring genes Neighboring gene R3H domain-containing protein 1 Neighboring gene UBX domain protein 4 Neighboring gene N-myc (and STAT) interactor Neighboring gene rho-related GTP-binding protein RhoE

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein mono-ADP-ribosyltransferase PARP14
Names
poly [ADP-ribose] polymerase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047584.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    13827717..13843122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034286731.1 → XP_034142622.1  protein mono-ADP-ribosyltransferase PARP14 isoform X2

    Conserved Domains (4) summary
    cd01439
    Location:1921 → 2039
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    pfam02825
    Location:1765 → 1824
    WWE; WWE domain
    cl00019
    Location:1448 → 1612
    Macro_SF; macrodomain superfamily
    cl17169
    Location:5 → 70
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_010879929.5 → XP_010878231.4  protein mono-ADP-ribosyltransferase PARP14 isoform X1

    Conserved Domains (4) summary
    cd01439
    Location:1946 → 2064
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    pfam02825
    Location:1790 → 1849
    WWE; WWE domain
    cl00019
    Location:1473 → 1637
    Macro_SF; macrodomain superfamily
    cl17169
    Location:5 → 70
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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