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arl5a ADP-ribosylation factor-like 5A [ Esox lucius (northern pike) ]

Gene ID: 105016117, updated on 18-Jun-2024

Summary

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Gene symbol
arl5a
Gene description
ADP-ribosylation factor-like 5A
See related
Ensembl:ENSELUG00000007052
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See arl5a in Genome Data Viewer
Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 16 NC_047584.1 (11795297..11808761)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG16 NC_025983.4 (22955666..22969057, complement)

Chromosome 16 - NC_047584.1Genomic Context describing neighboring genes Neighboring gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 Neighboring gene calcium channel, voltage-dependent, beta 4a subunit Neighboring gene nebulin Neighboring gene replication timing regulatory factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 5A
Names
ADP ribosylation factor like GTPase 5A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047584.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    11795297..11808761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010879718.3 → XP_010878020.1  ADP-ribosylation factor-like protein 5A

    UniProtKB/TrEMBL
    A0A6Q2YGJ8
    Related
    ENSELUP00000006064.2, ENSELUT00000009578.3
    Conserved Domains (2) summary
    cd04153
    Location:3 → 175
    Arl5_Arl8; Arf-like 5 (Arl5) and 8 (Arl8) GTPases
    smart00178
    Location:8 → 172
    SAR; Sar1p-like members of the Ras-family of small GTPases
Nucleotide Protein
Heading Accession and Version

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