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LOC105015680 ras-related protein Rab-15-like [ Esox lucius (northern pike) ]

Gene ID: 105015680, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105015680
Gene description
ras-related protein Rab-15-like
See related
Ensembl:ENSELUG00000036807
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105015680 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 15 NC_047583.1 (13821777..13832778)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG15 NC_025982.4 (14003784..14013778)

Chromosome 15 - NC_047583.1Genomic Context describing neighboring genes Neighboring gene sodium/bile acid cotransporter Neighboring gene protein max Neighboring gene signal-induced proliferation-associated 1-like protein 1 Neighboring gene glutathione peroxidase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-15-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047583.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    13821777..13832778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010879002.5 → XP_010877304.2  ras-related protein Rab-15-like isoform X1

    UniProtKB/TrEMBL
    A0A3P8ZJZ9
    Related
    ENSELUP00000090076.1, ENSELUT00000096696.1
    Conserved Domains (1) summary
    cd04117
    Location:9 → 172
    Rab15; Rab GTPase family 15 (Rab15)

  2. XM_020054292.2 → XP_019909851.2  ras-related protein Rab-15-like isoform X2

    UniProtKB/TrEMBL
    A0A3P8ZJZ9
    Conserved Domains (1) summary
    cl38936
    Location:11 → 148
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. XM_034297389.1 → XP_034153280.1  ras-related protein Rab-15-like isoform X2

    UniProtKB/TrEMBL
    A0A3P8ZJZ9
    Conserved Domains (1) summary
    cl38936
    Location:11 → 148
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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