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rab35b RAB35, member RAS oncogene family b [ Esox lucius (northern pike) ]

Gene ID: 105014197, updated on 22-Jun-2024

Summary

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Gene symbol
rab35b
Gene description
RAB35, member RAS oncogene family b
See related
Ensembl:ENSELUG00000023972
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
rab35
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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See rab35b in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 13 NC_047581.1 (14196237..14203312, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG13 NC_025980.4 (25671165..25678203)

Chromosome 13 - NC_047581.1Genomic Context describing neighboring genes Neighboring gene citron Rho-interacting kinase Neighboring gene uncharacterized LOC109616516 Neighboring gene BICD family like cargo adaptor 1 Neighboring gene GCN1 activator of EIF2AK4 Neighboring gene paxillin b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-35b
Names
Ras-related protein Rab-35
NP_001291011.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001304082.1 → NP_001291011.1  ras-related protein Rab-35b

    See identical proteins and their annotated locations for NP_001291011.1

    Status: PROVISIONAL

    Source sequence(s)
    BT080086
    UniProtKB/TrEMBL
    C1BZQ7
    Related
    ENSELUP00000025239.1, ENSELUT00000036885.3
    Conserved Domains (2) summary
    smart00175
    Location:9 → 170
    RAB; Rab subfamily of small GTPases
    cl21455
    Location:3 → 201
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047581.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    14196237..14203312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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