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noc2l NOC2-like nucleolar associated transcriptional repressor [ Esox lucius (northern pike) ]

Gene ID: 105013782, updated on 18-Jun-2024

Summary

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Gene symbol
noc2l
Gene description
NOC2-like nucleolar associated transcriptional repressor
See related
Ensembl:ENSELUG00000008668
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See noc2l in Genome Data Viewer
Location:
chromosome: 12
Exon count:
19
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 12 NC_047580.1 (16550202..16578289, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG12 NC_025979.4 (20769022..20796905)

Chromosome 12 - NC_047580.1Genomic Context describing neighboring genes Neighboring gene forkhead box protein J3-like Neighboring gene sterile alpha motif domain containing 11 Neighboring gene kelch-like family member 17 Neighboring gene pleckstrin homology domain containing, family N member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Noc1p-Noc2p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Noc2p-Noc3p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar complex protein 2 homolog
Names
nucleolar complex associated 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047580.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    16550202..16578289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010875559.2 → XP_010873861.1  nucleolar complex protein 2 homolog

    UniProtKB/TrEMBL
    A0A3P8XTX1, A0A6Q2WU01
    Related
    ENSELUP00000007933.1, ENSELUT00000006413.3
    Conserved Domains (1) summary
    pfam03715
    Location:317 → 612
    Noc2; Noc2p family
Nucleotide Protein
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