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arf3a ADP-ribosylation factor 3a [ Esox lucius (northern pike) ]

Gene ID: 105013557, updated on 18-Jun-2024

Summary

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Gene symbol
arf3a
Gene description
ADP-ribosylation factor 3a
See related
Ensembl:ENSELUG00000008395
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
arf3
Orthologs
zebrafish all
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Genomic context

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See arf3a in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 12 NC_047580.1 (29211762..29216149, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG12 NC_025979.4 (8093990..8098366)

Chromosome 12 - NC_047580.1Genomic Context describing neighboring genes Neighboring gene proliferation-associated 2G4, b Neighboring gene erb-b2 receptor tyrosine kinase 3b Neighboring gene wingless-type MMTV integration site family, member 10b Neighboring gene uncharacterized LOC109616389 Neighboring gene wingless-type MMTV integration site family, member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor 3a
Names
ADP ribosylation factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047580.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    29211762..29216149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010875134.4 → XP_010873436.1  ADP-ribosylation factor 3a

    See identical proteins and their annotated locations for XP_010873436.1

    UniProtKB/TrEMBL
    A0A3P8XT33, A0A6Q2Y4I5
    Related
    ENSELUP00000086337.1, ENSELUT00000101232.1
    Conserved Domains (1) summary
    cl38936
    Location:5 → 179
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_010875135.4 → XP_010873437.1  ADP-ribosylation factor 3a

    See identical proteins and their annotated locations for XP_010873437.1

    UniProtKB/TrEMBL
    A0A3P8XT33, A0A6Q2Y4I5
    Related
    ENSELUP00000007620.1, ENSELUT00000006948.3
    Conserved Domains (1) summary
    cl38936
    Location:5 → 179
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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