arf4 ADP ribosylation factor 4 [Esox lucius (northern pike)] - Gene

Summary

Gene symbol: arf4
Gene description: ADP ribosylation factor 4
See related: Ensembl:ENSELUG00000032802
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Esox lucius
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

Location:: chromosome: 2

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
104	current	fEsoLuc1.pri (GCF_011004845.1)	2	NC_047570.1 (38384602..38387154)
103	previous assembly	Eluc_v4 (GCF_004634155.1)	Linkage Group LG02	NC_025969.4 (1598433..1600920, complement)

Chromosome 2 - NC_047570.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables GTP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables GTPase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in intracellular protein transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in vesicle-mediated transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: ADP-ribosylation factor 4

NP_001291182.1

EC 3.6.5.1

EC 3.6.5.2

EC 3.6.5.3

EC 3.6.5.4

XP_019906628.2

EC 3.6.5.1

EC 3.6.5.2

EC 3.6.5.3

EC 3.6.5.4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001304253.1 → NP_001291182.1 ADP-ribosylation factor 4

See identical proteins and their annotated locations for NP_001291182.1

Status: PROVISIONAL

Source sequence(s)

BT079280

UniProtKB/TrEMBL

A0A6Q2X1Z1, C1BXF1

Related

ENSELUP00000050530.2, ENSELUT00000054244.2

Conserved Domains (2) summary

smart00178
Location:15 → 173

SAR; Sar1p-like members of the Ras-family of small GTPases

cl21455
Location:1 → 178

P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

NC_047570.1 Reference fEsoLuc1.pri Primary Assembly

Range

38384602..38387154

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_020051069.2 → XP_019906628.2 ADP-ribosylation factor 4 isoform X1

UniProtKB/TrEMBL

A0A6Q2XBG0

Conserved Domains (1) summary

cl40481
Location:1 → 178

YlqF_related_GTPase; Circularly permuted YlqF-related GTPases