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arf2a ADP-ribosylation factor 2a [ Esox lucius (northern pike) ]

Gene ID: 105013206, updated on 18-Jun-2024

Summary

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Gene symbol
arf2a
Gene description
ADP-ribosylation factor 2a
See related
Ensembl:ENSELUG00000043866
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
zebrafish all
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Genomic context

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See arf2a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 11 NC_047579.1 (43556034..43568438, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG11 NC_025978.4 (11763666..11775922)

Chromosome 11 - NC_047579.1Genomic Context describing neighboring genes Neighboring gene formin-like 1a Neighboring gene SRC kinase signaling inhibitor 1a Neighboring gene wingless-type MMTV integration site family, member 9B Neighboring gene golgi SNAP receptor complex member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor 2a
Names
ADP-ribosylation factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047579.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    43556034..43568438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010874560.5 → XP_010872862.1  ADP-ribosylation factor 2a

    See identical proteins and their annotated locations for XP_010872862.1

    UniProtKB/TrEMBL
    A0A3P8YVP5, A0A6Q2Y4I5
    Related
    ENSELUP00000086701.1, ENSELUT00000089905.1
    Conserved Domains (1) summary
    cl40481
    Location:1 → 179
    YlqF_related_GTPase; Circularly permuted YlqF-related GTPases
Nucleotide Protein
Heading Accession and Version

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