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fkrp fukutin related protein [ Esox lucius (northern pike) ]

Gene ID: 105012202, updated on 18-Jun-2024

Summary

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Gene symbol
fkrp
Gene description
fukutin related protein
See related
Ensembl:ENSELUG00000001171
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See fkrp in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 1 NC_047569.1 (32815352..32819803)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG01 NC_025968.4 (10384404..10388863, complement)

Chromosome 1 - NC_047569.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 184 Neighboring gene protein kinase D2 Neighboring gene striatin, calmodulin binding protein 4 Neighboring gene solute carrier family 1 member 5 Neighboring gene egl-9 family hypoxia-inducible factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fukutin-related protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047569.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    32815352..32819803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020046959.3 → XP_019902518.2  fukutin-related protein

    UniProtKB/TrEMBL
    A0A3P8YCI1
    Related
    ENSELUP00000013550.3, ENSELUT00000022123.3
    Conserved Domains (1) summary
    cl01378
    Location:373 → 513
    LicD; LicD family

  2. XM_010872883.5 → XP_010871185.3  fukutin-related protein

    UniProtKB/TrEMBL
    A0A3P8YCI1
    Related
    ENSELUP00000089311.1, ENSELUT00000091123.1
    Conserved Domains (1) summary
    cl01378
    Location:373 → 513
    LicD; LicD family
Nucleotide Protein
Heading Accession and Version

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