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LOC105012107 sarcalumenin [ Esox lucius (northern pike) ]

Gene ID: 105012107, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105012107
Gene description
sarcalumenin
See related
Ensembl:ENSELUG00000022266
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105012107 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 9 NC_047577.1 (10472820..10488177)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG09 NC_025976.4 (10589418..10604447)

Chromosome 9 - NC_047577.1Genomic Context describing neighboring genes Neighboring gene GLIS family zinc finger 2a Neighboring gene transcription factor AP-4 Neighboring gene adenylate cyclase 9 Neighboring gene CREB binding protein a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sarcalumenin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047577.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    10472820..10488177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010872738.4 → XP_010871040.3  sarcalumenin

    UniProtKB/TrEMBL
    A0A3P9AL76
    Related
    ENSELUP00000041445.2, ENSELUT00000034602.3
    Conserved Domains (4) summary
    PTZ00341
    Location:190 → 357
    PTZ00341; Ring-infected erythrocyte surface antigen; Provisional
    cd09913
    Location:509 → 750
    EHD; Eps15 homology domain (EHD), C-terminal domain
    PRK10811
    Location:278 → 467
    rne; ribonuclease E; Reviewed
    pfam16880
    Location:474 → 504
    EHD_N; N-terminal EH-domain containing protein
Nucleotide Protein
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