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gtpbp3 GTP binding protein 3, mitochondrial [ Esox lucius (northern pike) ]

Gene ID: 105012000, updated on 18-Jun-2024

Summary

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Gene symbol
gtpbp3
Gene description
GTP binding protein 3, mitochondrial
See related
Ensembl:ENSELUG00000019607
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See gtpbp3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 8 NC_047576.1 (32648436..32674013)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG08 NC_025975.4 (32705257..32730325)

Chromosome 8 - NC_047576.1Genomic Context describing neighboring genes Neighboring gene DET1 and DDB1 associated 1 Neighboring gene anoctamin 8b Neighboring gene plasmalemma vesicle associated protein b Neighboring gene BRISC and BRCA1 A complex member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA modification GTPase GTPBP3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047576.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    32648436..32674013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010872570.3 → XP_010870872.2  tRNA modification GTPase GTPBP3, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3P9AEF5
    Related
    ENSELUP00000020370.3, ENSELUT00000030765.3
    Conserved Domains (1) summary
    PRK05291
    Location:40 → 518
    trmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE

  2. XM_010872571.3 → XP_010870873.2  tRNA modification GTPase GTPBP3, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3P9AEF5
    Related
    ENSELUP00000039438.2, ENSELUT00000030754.3
    Conserved Domains (1) summary
    PRK05291
    Location:39 → 517
    trmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
Nucleotide Protein
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