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LOC105011497 ras-related protein Rab-11B-like [ Esox lucius (northern pike) ]

Gene ID: 105011497, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105011497
Gene description
ras-related protein Rab-11B-like
See related
Ensembl:ENSELUG00000035286
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105011497 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 8 NC_047576.1 (10904678..10908588)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG08 NC_025975.4 (10940710..10944864)

Chromosome 8 - NC_047576.1Genomic Context describing neighboring genes Neighboring gene translocase of inner mitochondrial membrane 44 homolog (yeast) Neighboring gene heterogeneous nuclear ribonucleoprotein M Neighboring gene membrane-associated ring finger (C3HC4) 2 Neighboring gene ras-related protein Rab-11B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in constitutive secretory pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-11B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047576.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    10904678..10908588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010871556.4 → XP_010869858.1  ras-related protein Rab-11B-like

    UniProtKB/TrEMBL
    A0A3P8Z096, A0A3P8Z0G2
    Related
    ENSELUP00000085547.1, ENSELUT00000104263.1
    Conserved Domains (2) summary
    PLN03110
    Location:1 → 216
    PLN03110; Rab GTPase; Provisional
    cd01868
    Location:9 → 173
    Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25
Nucleotide Protein
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