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mrm1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) [ Esox lucius (northern pike) ]

Gene ID: 105010773, updated on 18-Jun-2024

Summary

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Gene symbol
mrm1
Gene description
mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
See related
Ensembl:ENSELUG00000012392
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See mrm1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 7 NC_047575.1 (16431147..16435286, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Unplaced Scaffold NW_021640339.1 (18915..24037, complement)

Chromosome 7 - NC_047575.1Genomic Context describing neighboring genes Neighboring gene LIM/homeobox protein Lhx1 Neighboring gene uncharacterized LOC109615905 Neighboring gene dehydrogenase/reductase SDR family member 13 Neighboring gene dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rRNA methyltransferase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047575.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    16431147..16435286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010870358.3 → XP_010868660.2  rRNA methyltransferase 1, mitochondrial

    UniProtKB/TrEMBL
    A0A3P8Y8J1
    Related
    ENSELUP00000012119.2, ENSELUT00000020324.3
    Conserved Domains (2) summary
    cd18105
    Location:278 → 431
    SpoU-like_MRM1; SAM-dependent rRNA methylase related to MRM1
    pfam08032
    Location:184 → 258
    SpoU_sub_bind; RNA 2'-O ribose methyltransferase substrate binding
Nucleotide Protein
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