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LOC105008840 protein mono-ADP-ribosyltransferase PARP3 [ Esox lucius (northern pike) ]

Gene ID: 105008840, updated on 18-Sep-2024

Summary

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Gene symbol
LOC105008840
Gene description
protein mono-ADP-ribosyltransferase PARP3
See related
Ensembl:ENSELUG00000017996
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
parp3
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Genomic context

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See LOC105008840 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 17 NC_047585.1 (29013941..29029501)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG17 NC_025984.4 (19686856..19702411, complement)

Chromosome 17 - NC_047585.1Genomic Context describing neighboring genes Neighboring gene protein mono-ADP-ribosyltransferase PARP3-like Neighboring gene snaclec coagulation factor X-activating enzyme light chain 1-like Neighboring gene G protein-coupled receptor 61-like Neighboring gene C-type lectin domain family 3 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein mono-ADP-ribosyltransferase PARP3
Names
poly(ADP-ribose) polymerase family member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047585.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    29013941..29029501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010868206.3 → XP_010866508.2  protein mono-ADP-ribosyltransferase PARP3 isoform X2

    UniProtKB/TrEMBL
    A0A3P9AAE6
    Related
    ENSELUP00000096652.1, ENSELUT00000090066.1
    Conserved Domains (2) summary
    cd01437
    Location:182 → 531
    parp_like; Poly(ADP-ribose) polymerase (parp) catalytic domain catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a ...
    cl01581
    Location:61 → 158
    WGR; WGR domain

  2. XM_034287005.1 → XP_034142896.1  protein mono-ADP-ribosyltransferase PARP3 isoform X1

    UniProtKB/TrEMBL
    A0A3P9AAE6
    Related
    ENSELUP00000038181.2, ENSELUT00000028413.3
    Conserved Domains (2) summary
    cd01437
    Location:203 → 552
    parp_like; Poly(ADP-ribose) polymerase (parp) catalytic domain catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a ...
    cl01581
    Location:82 → 179
    WGR; WGR domain
Nucleotide Protein
Heading Accession and Version

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