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gig2o grass carp reovirus (GCRV)-induced gene 2o [ Esox lucius (northern pike) ]

Gene ID: 105007797, updated on 18-Sep-2024

Summary

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Gene symbol
gig2o
Gene description
grass carp reovirus (GCRV)-induced gene 2o
See related
Ensembl:ENSELUG00000017166
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
zebrafish all
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Genomic context

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See gig2o in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 7 NC_047575.1 (2849744..2850848)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG07 NC_025974.4 (48244049..48245153, complement)

Chromosome 7 - NC_047575.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109615542 Neighboring gene beta,beta-carotene 9',10'-oxygenase Neighboring gene sorting nexin-19 Neighboring gene uncharacterized LOC109615379

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
grass carp reovirus (GCRV)-induced gene 2o

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047575.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    2849744..2850848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010866854.4 → XP_010865156.1  grass carp reovirus (GCRV)-induced gene 2o

    UniProtKB/TrEMBL
    A0A3P9A9U7
    Related
    ENSELUP00000037500.3, ENSELUT00000027077.3
    Conserved Domains (1) summary
    cl00283
    Location:32 → 115
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...
Nucleotide Protein
Heading Accession and Version

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