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gfer growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [ Esox lucius (northern pike) ]

Gene ID: 105007326, updated on 18-Jun-2024

Summary

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Gene symbol
gfer
Gene description
growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae)
See related
Ensembl:ENSELUG00000024762
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
ALR
Orthologs
human zebrafish all
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Genomic context

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See gfer in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 11 NC_047579.1 (54806099..54808962)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG11 NC_025978.4 (515711..519095, complement)

Chromosome 11 - NC_047579.1Genomic Context describing neighboring genes Neighboring gene myosin XVAa Neighboring gene developmentally regulated GTP binding protein 2 Neighboring gene synaptogyrin 3a Neighboring gene zinc finger protein 598

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin-dependent sulfhydryl oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in liver development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FAD-linked sulfhydryl oxidase ALR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047579.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    54806099..54808962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010866211.5 → XP_010864513.2  FAD-linked sulfhydryl oxidase ALR isoform X1

    UniProtKB/TrEMBL
    A0A6Q2YLH6
    Related
    ENSELUP00000066418.2, ENSELUT00000085879.2
    Conserved Domains (1) summary
    pfam04777
    Location:114 → 203
    Evr1_Alr; Erv1 / Alr family

  2. XM_010866212.5 → XP_010864514.2  FAD-linked sulfhydryl oxidase ALR isoform X2

    UniProtKB/TrEMBL
    A0A6Q2YLH6
    Conserved Domains (1) summary
    pfam04777
    Location:113 → 202
    Evr1_Alr; Erv1 / Alr family
Nucleotide Protein
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