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rab6a RAB6A, member RAS oncogene family [ Esox lucius (northern pike) ]

Gene ID: 105006227, updated on 18-Jun-2024

Summary

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Gene symbol
rab6a
Gene description
RAB6A, member RAS oncogene family
See related
Ensembl:ENSELUG00000008876
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See rab6a in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 7 NC_047575.1 (19612671..19631383)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG07 NC_025974.4 (31345913..31365262, complement)

Chromosome 7 - NC_047575.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member B13 Neighboring gene mitochondrial ribosomal protein L48 Neighboring gene gap junction protein delta 1a Neighboring gene nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-6A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047575.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    19612671..19631383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010864658.4 → XP_010862960.1  ras-related protein Rab-6A isoform X4

    UniProtKB/TrEMBL
    A0A3P8XUR7
    Related
    ENSELUP00000008147.2, ENSELUT00000006060.3
    Conserved Domains (2) summary
    smart00175
    Location:14 → 171
    RAB; Rab subfamily of small GTPases
    cd01861
    Location:14 → 174
    Rab6; Rab GTPase family 6 (Rab6)

  2. XM_010864657.4 → XP_010862959.1  ras-related protein Rab-6A isoform X3

    UniProtKB/TrEMBL
    A0A3P8XUR7
    Related
    ENSELUP00000008175.3, ENSELUT00000006018.3
    Conserved Domains (1) summary
    cd01861
    Location:14 → 174
    Rab6; Rab GTPase family 6 (Rab6)

  3. XM_010864656.4 → XP_010862958.1  ras-related protein Rab-6A isoform X2

    UniProtKB/TrEMBL
    A0A3P8XWL6
    Conserved Domains (2) summary
    smart00175
    Location:14 → 171
    RAB; Rab subfamily of small GTPases
    cd01861
    Location:14 → 174
    Rab6; Rab GTPase family 6 (Rab6)

  4. XM_010864654.4 → XP_010862956.1  ras-related protein Rab-6A isoform X1

    UniProtKB/TrEMBL
    A0A3P8XUQ3, A0A3P8XWL6
    Related
    ENSELUP00000008176.2, ENSELUT00000006000.3
    Conserved Domains (1) summary
    cd01861
    Location:14 → 174
    Rab6; Rab GTPase family 6 (Rab6)
Nucleotide Protein
Heading Accession and Version

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