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ECHDC1 ethylmalonyl-CoA decarboxylase 1 [ Bison bison bison ]

Gene ID: 105004216, updated on 13-Mar-2024

Summary

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Gene symbol
ECHDC1
Gene description
ethylmalonyl-CoA decarboxylase 1
See related
Ensembl:ENSBBBG00000010612
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See ECHDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495034.1 (3685837..3744158)

NW_011495034.1Genomic Context describing neighboring genes Neighboring gene MTCL family member 3 Neighboring gene KIAA0408 ortholog Neighboring gene ring finger protein 146 Neighboring gene R-spondin 3 Neighboring gene uncharacterized LOC105004355

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495034.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enoyl-CoA hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylmalonyl-CoA decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495034.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    3685837..3744158
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010861750.1 → XP_010860052.1  ethylmalonyl-CoA decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A6P3J7Z5
    Conserved Domains (1) summary
    cd06558
    Location:57 → 248
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  2. XM_010861751.1 → XP_010860053.1  ethylmalonyl-CoA decarboxylase isoform X2

    UniProtKB/TrEMBL
    A0A6P3J0H1
    Related
    ENSBBBP00000017962.1, ENSBBBT00000013636.1
    Conserved Domains (1) summary
    cd06558
    Location:53 → 244
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
Nucleotide Protein
Heading Accession and Version

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