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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference Bison_UMD1.0 Primary Assembly
Genomic
-
NW_011495015.1 Reference Bison_UMD1.0 Primary Assembly
- Range
-
3509228..3635459
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_010859096.1 → XP_010857398.1 laminin subunit alpha-1 isoform X1
- UniProtKB/TrEMBL
-
A0A6P3IST8
- Conserved Domains (10) summary
-
- smart00136
Location:20 → 272
- LamNT; Laminin N-terminal domain (domain VI)
- COG1842
Location:1721 → 1985
- PspA; Phage shock protein A [Transcription, Signal transduction mechanisms]
- cd00055
Location:905 → 952
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:2906 → 3059
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam00052
Location:572 → 700
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:1047 → 1095
- Laminin_EGF; Laminin EGF domain
- pfam00054
Location:2757 → 2886
- Laminin_G_1; Laminin G domain
- pfam06008
Location:1578 → 1826
- Laminin_I; Laminin Domain I
- pfam06009
Location:2018 → 2149
- Laminin_II; Laminin Domain II
- cl02488
Location:1634 → 1858
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_010859097.1 → XP_010857399.1 laminin subunit alpha-1 isoform X2
- UniProtKB/TrEMBL
-
A0A6P3IYI2
- Related
- ENSBBBP00000019462.1, ENSBBBT00000009271.1
- Conserved Domains (10) summary
-
- smart00136
Location:20 → 272
- LamNT; Laminin N-terminal domain (domain VI)
- COG1842
Location:1721 → 1985
- PspA; Phage shock protein A [Transcription, Signal transduction mechanisms]
- cd00055
Location:905 → 952
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:2897 → 3050
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam00052
Location:572 → 700
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:1047 → 1095
- Laminin_EGF; Laminin EGF domain
- pfam00054
Location:2748 → 2877
- Laminin_G_1; Laminin G domain
- pfam06008
Location:1578 → 1826
- Laminin_I; Laminin Domain I
- pfam06009
Location:2018 → 2149
- Laminin_II; Laminin Domain II
- cl02488
Location:1634 → 1858
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...