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B3GALT1 beta-1,3-galactosyltransferase 1 [ Bison bison bison ]

Gene ID: 105002364, updated on 13-Mar-2024

Summary

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Gene symbol
B3GALT1
Gene description
beta-1,3-galactosyltransferase 1
See related
Ensembl:ENSBBBG00000017907
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See B3GALT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495014.1 (1168085..1222002, complement)

NW_011495014.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 39 Neighboring gene tudor domain-containing protein 10 pseudogene Neighboring gene lathosterol oxidase pseudogene Neighboring gene uncharacterized LOC105002365 Neighboring gene xin actin-binding repeat-containing protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495014.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495014.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    1168085..1222002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010858934.1 → XP_010857236.1  beta-1,3-galactosyltransferase 1

    See identical proteins and their annotated locations for XP_010857236.1

    UniProtKB/TrEMBL
    A0A6P3ISD8
    Related
    ENSBBBP00000023369.1, ENSBBBT00000030254.1
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 279
    Galactosyl_T; Galactosyltransferase

  2. XM_010858935.1 → XP_010857237.1  beta-1,3-galactosyltransferase 1

    See identical proteins and their annotated locations for XP_010857237.1

    UniProtKB/TrEMBL
    A0A6P3ISD8
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 279
    Galactosyl_T; Galactosyltransferase

  3. XM_010858936.1 → XP_010857238.1  beta-1,3-galactosyltransferase 1

    See identical proteins and their annotated locations for XP_010857238.1

    UniProtKB/TrEMBL
    A0A6P3ISD8
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 279
    Galactosyl_T; Galactosyltransferase

  4. XM_010858937.1 → XP_010857239.1  beta-1,3-galactosyltransferase 1

    See identical proteins and their annotated locations for XP_010857239.1

    UniProtKB/TrEMBL
    A0A6P3ISD8
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 279
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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