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DERA deoxyribose-phosphate aldolase [ Bison bison bison ]

Gene ID: 105002205, updated on 13-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
Ensembl:ENSBBBG00000021031
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494962.1 (6487756..6607583)

NW_011494962.1Genomic Context describing neighboring genes Neighboring gene EGFR pathway substrate 8, signaling adaptor Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene solute carrier family 15 member 5 Neighboring gene microsomal glutathione S-transferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494962.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494962.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    6487756..6607583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010858744.1 → XP_010857046.1  deoxyribose-phosphate aldolase

    See identical proteins and their annotated locations for XP_010857046.1

    UniProtKB/TrEMBL
    A0A6P3IRY9
    Related
    ENSBBBP00000025675.1, ENSBBBT00000023425.1
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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