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CLEC2B C-type lectin domain family 2 member B [ Bison bison bison ]

Gene ID: 105002118, updated on 13-Mar-2024

Summary

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Gene symbol
CLEC2B
Gene description
C-type lectin domain family 2 member B
See related
Ensembl:ENSBBBG00000023454
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human all
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Genomic context

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See CLEC2B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494962.1 (491200..512121, complement)

NW_011494962.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 2 member D11-like Neighboring gene C-type lectin domain family 2 member D11-like Neighboring gene killer cell lectin like receptor F2 Neighboring gene C-type lectin domain family 2 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494962.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 2 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494962.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    491200..512121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010858609.1 → XP_010856911.1  C-type lectin domain family 2 member B isoform X1

    See identical proteins and their annotated locations for XP_010856911.1

    UniProtKB/TrEMBL
    A0A6P3IRG2
    Conserved Domains (2) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    PHA03097
    Location:25 → 173
    PHA03097; C-type lectin-like protein; Provisional

  2. XM_010858608.1 → XP_010856910.1  C-type lectin domain family 2 member B isoform X1

    See identical proteins and their annotated locations for XP_010856910.1

    UniProtKB/TrEMBL
    A0A6P3IRG2
    Conserved Domains (2) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    PHA03097
    Location:25 → 173
    PHA03097; C-type lectin-like protein; Provisional

  3. XM_010858607.1 → XP_010856909.1  C-type lectin domain family 2 member B isoform X1

    See identical proteins and their annotated locations for XP_010856909.1

    UniProtKB/TrEMBL
    A0A6P3IRG2
    Conserved Domains (2) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    PHA03097
    Location:25 → 173
    PHA03097; C-type lectin-like protein; Provisional

  4. XM_010858606.1 → XP_010856908.1  C-type lectin domain family 2 member B isoform X1

    See identical proteins and their annotated locations for XP_010856908.1

    UniProtKB/TrEMBL
    A0A6P3IRG2
    Conserved Domains (2) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    PHA03097
    Location:25 → 173
    PHA03097; C-type lectin-like protein; Provisional

  5. XM_010858611.1 → XP_010856913.1  C-type lectin domain family 2 member B isoform X3

    UniProtKB/TrEMBL
    A0A6P3IRG5
    Related
    ENSBBBP00000027298.1, ENSBBBT00000026863.1
    Conserved Domains (1) summary
    cd03593
    Location:34 → 145
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  6. XM_010858610.1 → XP_010856912.1  C-type lectin domain family 2 member B isoform X2

    UniProtKB/TrEMBL
    A0A6P3IZN6
    Conserved Domains (1) summary
    cl02432
    Location:63 → 146
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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