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PIGK phosphatidylinositol glycan anchor biosynthesis class K [ Bison bison bison ]

Gene ID: 105001358, updated on 13-Mar-2024

Summary

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Gene symbol
PIGK
Gene description
phosphatidylinositol glycan anchor biosynthesis class K
See related
Ensembl:ENSBBBG00000002238
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See PIGK in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494954.1 (5113651..5251322)

NW_011494954.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 5 Neighboring gene transmembrane protein 170A pseudogene Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 Neighboring gene transcription initiation factor TFIID subunit 9-like Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494954.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GPI-anchor transamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI-anchor transamidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494954.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    5113651..5251322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010857605.1 → XP_010855907.1  GPI-anchor transamidase

    UniProtKB/TrEMBL
    A0A6P3IWT2
    Related
    ENSBBBP00000018887.1, ENSBBBT00000011004.1
    Conserved Domains (1) summary
    cl00042
    Location:42 → 339
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
Nucleotide Protein
Heading Accession and Version

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