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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Bison bison bison ]

Gene ID: 105000000, updated on 2-May-2024

Summary

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Gene symbol
B3GNT5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
See related
Ensembl:ENSBBBG00000007365
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494939.1 (4857528..4873506)

NW_011494939.1Genomic Context describing neighboring genes Neighboring gene methylcrotonyl-CoA carboxylase subunit 1 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene L-lactate dehydrogenase B chain pseudogene Neighboring gene uncharacterized LOC105000004

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494939.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494939.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    4857528..4873506
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010855648.1 → XP_010853950.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_010853950.1

    UniProtKB/TrEMBL
    A0A6P3IHU4
    Conserved Domains (1) summary
    cl21608
    Location:104 → 301
    Galactosyl_T; Galactosyltransferase

  2. XM_010855651.1 → XP_010853953.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_010853953.1

    UniProtKB/TrEMBL
    A0A6P3IHU4
    Related
    ENSBBBP00000007488.1, ENSBBBT00000002339.1
    Conserved Domains (1) summary
    cl21608
    Location:104 → 301
    Galactosyl_T; Galactosyltransferase

  3. XM_010855650.1 → XP_010853952.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_010853952.1

    UniProtKB/TrEMBL
    A0A6P3IHU4
    Conserved Domains (1) summary
    cl21608
    Location:104 → 301
    Galactosyl_T; Galactosyltransferase

  4. XM_010855652.1 → XP_010853954.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_010853954.1

    UniProtKB/TrEMBL
    A0A6P3IHU4
    Conserved Domains (1) summary
    cl21608
    Location:104 → 301
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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