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ACOD1 aconitate decarboxylase 1 [ Bison bison bison ]

Gene ID: 104999571, updated on 12-Mar-2024

Summary

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Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
See related
Ensembl:ENSBBBG00000003022
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See ACOD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494926.1 (5827859..5835749, complement)

NW_011494926.1Genomic Context describing neighboring genes Neighboring gene CLN5 intracellular trafficking protein Neighboring gene uncharacterized LOC104999570 Neighboring gene potassium channel tetramerization domain containing 12 Neighboring gene uncharacterized LOC104999572

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494926.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494926.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    5827859..5835749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010855134.1 → XP_010853436.1  cis-aconitate decarboxylase

    UniProtKB/TrEMBL
    A0A6P3IG54
    Related
    ENSBBBP00000020308.1, ENSBBBT00000006820.1
    Conserved Domains (1) summary
    pfam03972
    Location:8 → 449
    MmgE_PrpD; MmgE/PrpD family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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