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FMOD fibromodulin [ Bison bison bison ]

Gene ID: 104998782, updated on 12-Mar-2024

Summary

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Gene symbol
FMOD
Gene description
fibromodulin
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See FMOD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494910.1 (925038..935249, complement)

NW_011494910.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L10-like Neighboring gene BTG anti-proliferation factor 2 Neighboring gene proline and arginine rich end leucine rich repeat protein Neighboring gene opticin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494910.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: fibromodulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494910.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    925038..935249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010854123.1 → XP_010852425.1  LOW QUALITY PROTEIN: fibromodulin

    See identical proteins and their annotated locations for XP_010852425.1

    UniProtKB/TrEMBL
    A0A6P3IMY1
    Conserved Domains (3) summary
    sd00033
    Location:107 → 130
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:246 → 325
    LRR_8; Leucine rich repeat
    cl26018
    Location:81 → 281
    NEL; C-terminal novel E3 ligase, LRR-interacting
Nucleotide Protein
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