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FUCA2 alpha-L-fucosidase 2 [ Bison bison bison ]

Gene ID: 104997029, updated on 12-Mar-2024

Summary

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Gene symbol
FUCA2
Gene description
alpha-L-fucosidase 2
See related
Ensembl:ENSBBBG00000007155
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See FUCA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494875.1 (1909505..1930368, complement)

NW_011494875.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase tRNA specific 2 Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene ribosome production factor 1 pseudogene Neighboring gene beta-chimaerin pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494875.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma alpha-L-fucosidase
Names
fucosidase, alpha-L- 2, plasma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494875.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    1909505..1930368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010851466.1 → XP_010849768.1  plasma alpha-L-fucosidase

    UniProtKB/TrEMBL
    A0A6P3I5N8
    Related
    ENSBBBP00000014366.1, ENSBBBT00000024853.1
    Conserved Domains (3) summary
    smart00812
    Location:26 → 411
    Alpha_L_fucos; Alpha-L-fucosidase
    COG3669
    Location:58 → 398
    AfuC; Alpha-L-fucosidase [Carbohydrate transport and metabolism]
    pfam16757
    Location:374 → 462
    Fucosidase_C; Alpha-L-fucosidase C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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