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ASGR1 asialoglycoprotein receptor 1 [ Bison bison bison ]

Gene ID: 104993933, updated on 19-Jun-2024

Summary

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Gene symbol
ASGR1
Gene description
asialoglycoprotein receptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human all
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Genomic context

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See ASGR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494821.1 (291614..295483)

NW_011494821.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase very long chain Neighboring gene discs large MAGUK scaffold protein 4 Neighboring gene asialoglycoprotein receptor 2 Neighboring gene C-type lectin domain family 10 member A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494821.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fucose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological process involved in interspecies interaction between organisms IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asialoglycoprotein receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494821.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    291614..295483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010847354.1 → XP_010845656.1  asialoglycoprotein receptor 1

    See identical proteins and their annotated locations for XP_010845656.1

    UniProtKB/TrEMBL
    A0A6P3HST0
    Conserved Domains (2) summary
    cd03590
    Location:153 → 277
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:18 → 143
    Lectin_N; Hepatic lectin, N-terminal domain

  2. XM_010847355.1 → XP_010845657.1  asialoglycoprotein receptor 1

    See identical proteins and their annotated locations for XP_010845657.1

    UniProtKB/TrEMBL
    A0A6P3HST0
    Conserved Domains (2) summary
    cd03590
    Location:153 → 277
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:18 → 143
    Lectin_N; Hepatic lectin, N-terminal domain

  3. XM_010847356.1 → XP_010845658.1  asialoglycoprotein receptor 1

    See identical proteins and their annotated locations for XP_010845658.1

    UniProtKB/TrEMBL
    A0A6P3HST0
    Conserved Domains (2) summary
    cd03590
    Location:153 → 277
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:18 → 143
    Lectin_N; Hepatic lectin, N-terminal domain

  4. XM_010847353.1 → XP_010845655.1  asialoglycoprotein receptor 1

    See identical proteins and their annotated locations for XP_010845655.1

    UniProtKB/TrEMBL
    A0A6P3HST0
    Conserved Domains (2) summary
    cd03590
    Location:153 → 277
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:18 → 143
    Lectin_N; Hepatic lectin, N-terminal domain
Nucleotide Protein
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