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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Bison bison bison ]

Gene ID: 104991345, updated on 12-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
Ensembl:ENSBBBG00000019892
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Also known as
KIRREL
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494758.1 (488696..512181)

NW_011494758.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene Fc receptor-like protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494758.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494758.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    488696..512181
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010843763.1 → XP_010842065.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A6P3HU31
    Related
    ENSBBBP00000011946.1, ENSBBBT00000021353.1
    Conserved Domains (5) summary
    cd05898
    Location:373 → 469
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00410
    Location:381 → 469
    IG_like; Immunoglobulin like
    pfam07679
    Location:56 → 150
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:219 → 297
    Ig_2; Immunoglobulin domain
    cl11960
    Location:172 → 239
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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