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SNX30 sorting nexin family member 30 [ Bison bison bison ]

Gene ID: 104991191, updated on 12-Mar-2024

Summary

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Gene symbol
SNX30
Gene description
sorting nexin family member 30
See related
Ensembl:ENSBBBG00000021834
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See SNX30 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494755.1 (8969547..9041881)

NW_011494755.1Genomic Context describing neighboring genes Neighboring gene KIAA1958 ortholog Neighboring gene INTS3 and NABP interacting protein Neighboring gene solute carrier family 46 member 2 Neighboring gene major allergen Equ c 1-like Neighboring gene major allergen Equ c 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494755.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494755.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    8969547..9041881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010843592.1 → XP_010841894.1  sorting nexin-30 isoform X1

    UniProtKB/TrEMBL
    A0A6P3HRT1
    Conserved Domains (2) summary
    cd07283
    Location:163 → 278
    PX_SNX30; The phosphoinositide binding Phox Homology domain of Sorting Nexin 30
    cd07667
    Location:262 → 501
    BAR_SNX30; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 30

  2. XM_010843594.1 → XP_010841896.1  sorting nexin-30 isoform X3

    UniProtKB/TrEMBL
    A0A6P3HHW8
    Related
    ENSBBBP00000014101.1, ENSBBBT00000024474.1
    Conserved Domains (2) summary
    cd06860
    Location:8 → 123
    PX_SNX7_30_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 7 and 30
    cd07667
    Location:107 → 346
    BAR_SNX30; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 30

  3. XM_010843593.1 → XP_010841895.1  sorting nexin-30 isoform X2

    UniProtKB/TrEMBL
    A0A6P3HTL7
    Conserved Domains (2) summary
    cd07283
    Location:113 → 228
    PX_SNX30; The phosphoinositide binding Phox Homology domain of Sorting Nexin 30
    cd07667
    Location:212 → 451
    BAR_SNX30; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 30
Nucleotide Protein
Heading Accession and Version

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