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PGAP3 post-GPI attachment to proteins phospholipase 3 [ Bison bison bison ]

Gene ID: 104990535, updated on 12-Mar-2024

Summary

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Gene symbol
PGAP3
Gene description
post-GPI attachment to proteins phospholipase 3
See related
Ensembl:ENSBBBG00000000329
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See PGAP3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494752.1 (3200876..3215063)

NW_011494752.1Genomic Context describing neighboring genes Neighboring gene migration and invasion enhancer 1 Neighboring gene erb-b2 receptor tyrosine kinase 2 Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene titin-cap

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494752.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
post-GPI attachment to proteins factor 3
Names
post-GPI attachment to proteins 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494752.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    3200876..3215063
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010842662.1 → XP_010840964.1  post-GPI attachment to proteins factor 3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3HP35
    Related
    ENSBBBP00000015421.1, ENSBBBT00000026435.1
    Conserved Domains (1) summary
    pfam04080
    Location:54 → 305
    Per1; Per1-like

  2. XM_010842663.1 → XP_010840965.1  post-GPI attachment to proteins factor 3 isoform X2

    UniProtKB/TrEMBL
    A0A6P3HR09
    Related
    ENSBBBP00000015416.1, ENSBBBT00000026427.1
    Conserved Domains (1) summary
    pfam04080
    Location:54 → 254
    Per1; Per1-like
Nucleotide Protein
Heading Accession and Version

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