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COG5 component of oligomeric golgi complex 5 [ Bison bison bison ]

Gene ID: 104989704, updated on 12-Mar-2024

Summary

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Gene symbol
COG5
Gene description
component of oligomeric golgi complex 5
See related
Ensembl:ENSBBBG00000015295
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See COG5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494734.1 (2661626..2943323, complement)

NW_011494734.1Genomic Context describing neighboring genes Neighboring gene 39S ribosomal protein L22, mitochondrial pseudogene Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta Neighboring gene HMG-box transcription factor 1 Neighboring gene G protein-coupled receptor 22 Neighboring gene dihydrouridine synthase 4 like Neighboring gene B cell receptor associated protein 29

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494734.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494734.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    2661626..2943323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010841464.1 → XP_010839766.1  conserved oligomeric Golgi complex subunit 5 isoform X1

    UniProtKB/TrEMBL
    A0A6P3HC29
    Related
    ENSBBBP00000007024.1, ENSBBBT00000003174.1
    Conserved Domains (2) summary
    pfam10392
    Location:35 → 158
    COG5; Golgi transport complex subunit 5
    cl00549
    Location:639 → 749
    ABC_membrane; ABC transporter transmembrane region

  2. XM_010841466.1 → XP_010839768.1  conserved oligomeric Golgi complex subunit 5 isoform X3

    UniProtKB/TrEMBL
    A0A6P3H969
    Conserved Domains (1) summary
    cl00549
    Location:515 → 625
    ABC_membrane; ABC transporter transmembrane region

  3. XM_010841465.1 → XP_010839767.1  conserved oligomeric Golgi complex subunit 5 isoform X2

    UniProtKB/TrEMBL
    A0A6P3HK11
    Conserved Domains (2) summary
    pfam10392
    Location:35 → 158
    COG5; Golgi transport complex subunit 5
    cl00549
    Location:639 → 749
    ABC_membrane; ABC transporter transmembrane region
Nucleotide Protein
Heading Accession and Version

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