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ABAT 4-aminobutyrate aminotransferase [ Bison bison bison ]

Gene ID: 104988947, updated on 12-Mar-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
See related
Ensembl:ENSBBBG00000019835
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See ABAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494716.1 (5766833..5854567)

NW_011494716.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104988944 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene transmembrane protein 186 Neighboring gene phosphomannomutase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494716.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-aminobutyrate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494716.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    5766833..5854567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010840453.1 → XP_010838755.1  4-aminobutyrate aminotransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P3HJM3
    Conserved Domains (2) summary
    TIGR00699
    Location:34 → 507
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type
    COG0160
    Location:42 → 509
    GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]

  2. XM_010840454.1 → XP_010838756.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P3H9G5
    Related
    ENSBBBP00000024738.1, ENSBBBT00000031145.1
    Conserved Domains (2) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type
    COG0160
    Location:42 → 498
    GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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