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CD93 CD93 molecule [ Bison bison bison ]

Gene ID: 104985954, updated on 12-Mar-2024

Summary

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Gene symbol
CD93
Gene description
CD93 molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See CD93 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494635.1 (3401494..3407543, complement)

NW_011494635.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit beta type-6 pseudogene Neighboring gene elongation factor 1-beta pseudogene Neighboring gene thrombomodulin Neighboring gene nuclear transport factor 2 like export factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494635.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement component C1q receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494635.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    3401494..3407543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010836343.1 → XP_010834645.1  complement component C1q receptor

    UniProtKB/TrEMBL
    A0A6P3H822
    Conserved Domains (5) summary
    smart00179
    Location:342 → 373
    EGF_CA; Calcium-binding EGF-like domain
    pfam12662
    Location:323 → 345
    cEGF; Complement Clr-like EGF-like
    pfam14670
    Location:261 → 297
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:376 → 416
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl02432
    Location:31 → 183
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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