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XYLB xylulokinase [ Bison bison bison ]

Gene ID: 104985364, updated on 11-Apr-2024

Summary

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Gene symbol
XYLB
Gene description
xylulokinase
See related
Ensembl:ENSBBBG00000020237
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See XYLB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494615.1 (3310537..3353028, complement)

NW_011494615.1Genomic Context describing neighboring genes Neighboring gene exo/endonuclease G Neighboring gene activin A receptor type 2B Neighboring gene solute carrier family 22 member 14 Neighboring gene solute carrier family 22 member 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494615.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylulokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylulose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylulose kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494615.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    3310537..3353028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010835502.1 → XP_010833804.1  xylulose kinase

    UniProtKB/TrEMBL
    A0A6P3H3W4
    Related
    ENSBBBP00000012421.1, ENSBBBT00000031348.1
    Conserved Domains (2) summary
    PLN02669
    Location:34 → 548
    PLN02669; xylulokinase
    cd07776
    Location:34 → 492
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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