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PDE9A phosphodiesterase 9A [ Bison bison bison ]

Gene ID: 104984947, updated on 12-Mar-2024

Summary

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Gene symbol
PDE9A
Gene description
phosphodiesterase 9A
See related
Ensembl:ENSBBBG00000014410
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See PDE9A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494609.1 (8332564..8437076, complement)

NW_011494609.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit V3 Neighboring gene WD repeat domain 4 Neighboring gene uncharacterized LOC104984949 Neighboring gene solute carrier family 37 member 1 Neighboring gene radial spoke head component 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494609.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494609.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    8332564..8437076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010834920.1 → XP_010833222.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

    UniProtKB/TrEMBL
    A0A6P3H2I3
    Conserved Domains (1) summary
    pfam00233
    Location:251 → 479
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_010834919.1 → XP_010833221.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

    UniProtKB/TrEMBL
    A0A6P3GUA9
    Related
    ENSBBBP00000005502.1, ENSBBBT00000006135.1
    Conserved Domains (1) summary
    pfam00233
    Location:251 → 479
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_010834921.1 → XP_010833223.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

    See identical proteins and their annotated locations for XP_010833223.1

    UniProtKB/TrEMBL
    A0A6P3GNY7
    Conserved Domains (1) summary
    pfam00233
    Location:104 → 332
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  4. XM_010834922.1 → XP_010833224.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

    See identical proteins and their annotated locations for XP_010833224.1

    UniProtKB/TrEMBL
    A0A6P3GNY7
    Related
    ENSBBBP00000020543.1, ENSBBBT00000006160.1
    Conserved Domains (1) summary
    pfam00233
    Location:104 → 332
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
Heading Accession and Version

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