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SMPDL3B sphingomyelin phosphodiesterase acid like 3B [ Bison bison bison ]

Gene ID: 104981185, updated on 12-Mar-2024

Summary

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Gene symbol
SMPDL3B
Gene description
sphingomyelin phosphodiesterase acid like 3B
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See SMPDL3B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495069.1 (10093540..10126769)

NW_011495069.1Genomic Context describing neighboring genes Neighboring gene thymocyte selection associated family member 2 Neighboring gene replication protein A2 Neighboring gene XK related 8 Neighboring gene EYA transcriptional coactivator and phosphatase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495069.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acid sphingomyelinase-like phosphodiesterase 3b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495069.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    10093540..10126769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010830152.1 → XP_010828454.1  acid sphingomyelinase-like phosphodiesterase 3b isoform X1

    UniProtKB/TrEMBL
    A0A6P3GNQ4
    Conserved Domains (2) summary
    COG1409
    Location:22 → 310
    CpdA; 3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms]
    cd00842
    Location:23 → 288
    MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain

  2. XM_010830153.1 → XP_010828455.1  acid sphingomyelinase-like phosphodiesterase 3b isoform X2

    UniProtKB/TrEMBL
    A0A6P3GPQ6
    Conserved Domains (2) summary
    COG1409
    Location:22 → 296
    CpdA; 3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms]
    cd00842
    Location:23 → 323
    MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain
Nucleotide Protein
Heading Accession and Version

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