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PNPLA4 patatin like phospholipase domain containing 4 [ Bison bison bison ]

Gene ID: 104981013, updated on 12-Mar-2024

Summary

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Gene symbol
PNPLA4
Gene description
patatin like phospholipase domain containing 4
See related
Ensembl:ENSBBBG00000017745
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human all
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Genomic context

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See PNPLA4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495066.1 (1042909..1170372, complement)

NW_011495066.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase DDX3X-like Neighboring gene angiotensin II receptor type 2 Neighboring gene uncharacterized LOC104981020 Neighboring gene anosmin 1 Neighboring gene uncharacterized LOC104981015

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495066.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triglyceride lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495066.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    1042909..1170372 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010829900.1 → XP_010828202.1  patatin-like phospholipase domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A6P3GNE7
    Conserved Domains (1) summary
    cd07222
    Location:5 → 210
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  2. XM_010829901.1 → XP_010828203.1  patatin-like phospholipase domain-containing protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A6P3G972
    Conserved Domains (1) summary
    cd07222
    Location:5 → 214
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  3. XM_010829895.1 → XP_010828197.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828197.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  4. XM_010829891.1 → XP_010828193.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828193.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  5. XM_010829890.1 → XP_010828192.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828192.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  6. XM_010829894.1 → XP_010828196.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828196.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  7. XM_010829893.1 → XP_010828195.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828195.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  8. XM_010829899.1 → XP_010828201.1  patatin-like phospholipase domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P3GFD6
    Conserved Domains (1) summary
    cd07222
    Location:5 → 228
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  9. XM_010829889.1 → XP_010828191.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828191.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  10. XM_010829896.1 → XP_010828198.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828198.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  11. XM_010829892.1 → XP_010828194.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828194.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  12. XM_010829897.1 → XP_010828199.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    See identical proteins and their annotated locations for XP_010828199.1

    UniProtKB/TrEMBL
    A0A6P3GFD2
    Related
    ENSBBBP00000009596.1, ENSBBBT00000017906.1
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

RNA

  1. XR_824323.1 RNA Sequence

  2. XR_824322.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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