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ACADS acyl-CoA dehydrogenase short chain [ Bison bison bison ]

Gene ID: 104980065, updated on 18-Sep-2024

Summary

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Gene symbol
ACADS
Gene description
acyl-CoA dehydrogenase short chain
See related
Ensembl:ENSBBBG00000002411
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See ACADS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495054.1 (6376337..6391556)

NW_011495054.1Genomic Context describing neighboring genes Neighboring gene malectin Neighboring gene unc-119 lipid binding chaperone B Neighboring gene signal peptide peptidase like 3 Neighboring gene HNF1 homeobox A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495054.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in butyrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short-chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-CoA dehydrogenase, C-2 to C-3 short chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495054.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    6376337..6391556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010828637.1 → XP_010826939.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P3GJI6
    Conserved Domains (2) summary
    cd01158
    Location:1 → 337
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
    COG1960
    Location:1 → 341
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]

  2. XM_010828636.1 → XP_010826938.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P3G555
    Related
    ENSBBBP00000003497.1, ENSBBBT00000009865.1
    Conserved Domains (2) summary
    cd01158
    Location:1 → 369
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
    COG1960
    Location:1 → 373
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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