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chst7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104965025, updated on 12-Mar-2024

Summary

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Gene symbol
chst7
Gene description
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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See chst7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011369945.1 (22725000..22728890, complement)

NW_011369945.1Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 2 subunit alpha 1 Neighboring gene paired amphipathic helix protein Sin3a-like Neighboring gene tryptophan 5-hydroxylase-like Neighboring gene tubulin gamma complex component 5 Neighboring gene uncharacterized LOC104965026

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011369945.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011369945.1 Reference NC01 Primary Assembly

    Range
    22725000..22728890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010793966.1 → XP_010792268.1  carbohydrate sulfotransferase 7

    UniProtKB/TrEMBL
    A0A6I9PXH8
    Conserved Domains (1) summary
    cl21551
    Location:213 → 403
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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