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ctbp2a C-terminal binding protein 2a [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104964347, updated on 12-Mar-2024

Summary

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Gene symbol
ctbp2a
Gene description
C-terminal binding protein 2a
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
zebrafish all
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Genomic context

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See ctbp2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011334620.1 (101958..173290, complement)

NW_011334620.1Genomic Context describing neighboring genes Neighboring gene EEF1A lysine methyltransferase 2 Neighboring gene uncharacterized LOC104964339 Neighboring gene ubiquitin thioesterase ZRANB1-like Neighboring gene autophagy-related protein 16-1-like Neighboring gene testis expressed 36

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011334620.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 2; histone-lysine N-methyltransferase 2D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011334620.1 Reference NC01 Primary Assembly

    Range
    101958..173290 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010793094.1 → XP_010791396.1  histone-lysine N-methyltransferase 2D isoform X1

    UniProtKB/TrEMBL
    A0A6I9Q1I5
    Conserved Domains (2) summary
    COG0111
    Location:792 → 1102
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:776 → 1094
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_010793112.1 → XP_010791414.1  C-terminal-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6I9PK17
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_010793119.1 → XP_010791421.1  C-terminal-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6I9PK17
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_010793104.1 → XP_010791406.1  histone-lysine N-methyltransferase 2D isoform X2

    UniProtKB/TrEMBL
    A0A6I9Q1J1
    Conserved Domains (3) summary
    COG0111
    Location:792 → 1102
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:776 → 1094
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    pfam15547
    Location:581 → 678
    DUF4654; Domain of unknown function (DUF4654)
Nucleotide Protein
Heading Accession and Version

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