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si:dkeyp-82a1.6 torsin-1A-interacting protein 2-like [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104960131, updated on 12-Mar-2024

Summary

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Gene symbol
si:dkeyp-82a1.6
Gene description
torsin-1A-interacting protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
zebrafish all
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Genomic context

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See si:dkeyp-82a1.6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011364249.1 (137..3819, complement)

NW_011364249.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104960130

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011364249.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011364249.1 Reference NC01 Primary Assembly

    Range
    137..3819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010788096.1 → XP_010786398.1  torsin-1A-interacting protein 2-like isoform X3

    UniProtKB/TrEMBL
    A0A6I9PHD5
    Conserved Domains (1) summary
    pfam05609
    Location:284 → 497
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_010788095.1 → XP_010786397.1  torsin-1A-interacting protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A6I9PDZ0
    Conserved Domains (1) summary
    pfam05609
    Location:295 → 508
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_010788094.1 → XP_010786396.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A6I9PL89
    Conserved Domains (1) summary
    pfam05609
    Location:328 → 541
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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