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si:ch73-91k6.2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104939903, updated on 12-Mar-2024

Summary

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Gene symbol
si:ch73-91k6.2
Gene description
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Locus tag
EH28_13461
See related
Ensembl:ENSLCRG00005021011
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
zebrafish all
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Genomic context

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See si:ch73-91k6.2 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
2
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XI NC_040021.1 (21187852..21191350)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608865.1 (240516..243948, complement)

Chromosome XI - NC_040021.1Genomic Context describing neighboring genes Neighboring gene thrombomodulin Neighboring gene thrombomodulin Neighboring gene BRO1 domain and CAAX motif containing Neighboring gene uncharacterized LOC109140572 Neighboring gene family with sequence similarity 177 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040021.1 Reference L_crocea_2.0 Primary Assembly

    Range
    21187852..21191350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010756442.3 → XP_010754744.3  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Related
    ENSLCRP00005056457.1, ENSLCRT00005057348.1
Nucleotide Protein
Heading Accession and Version

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