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st3gal5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104939171, updated on 12-Mar-2024

Summary

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Gene symbol
st3gal5
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 5
See related
Ensembl:ENSLCRG00005020763
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
zebrafish all
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Genomic context

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See st3gal5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
9
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) I NC_040011.1 (41973550..41987501, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608177.1 (882867..896760, complement)

Chromosome I - NC_040011.1Genomic Context describing neighboring genes Neighboring gene centromere protein U Neighboring gene long-chain-fatty-acid--CoA ligase 1-like Neighboring gene RNA polymerase I subunit A Neighboring gene small nucleolar RNA SNORA5 Neighboring gene small nucleolar RNA SNORA5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lactosylceramide alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040011.1 Reference L_crocea_2.0 Primary Assembly

    Range
    41973550..41987501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010755666.3 → XP_010753968.2  lactosylceramide alpha-2,3-sialyltransferase isoform X1

    Related
    ENSLCRP00005055714.1, ENSLCRT00005056597.1

  2. XM_027282350.1 → XP_027138151.1  lactosylceramide alpha-2,3-sialyltransferase isoform X2

    Related
    ENSLCRP00005055712.1, ENSLCRT00005056595.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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