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chs1 chitin synthase 1 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104938844, updated on 26-Jun-2024

Summary

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Gene symbol
chs1
Gene description
chitin synthase 1
Locus tag
EH28_22133
See related
Ensembl:ENSLCRG00005008539
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
zebrafish all
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Genomic context

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See chs1 in Genome Data Viewer
Location:
chromosome: VIII
Exon count:
35
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) VIII NC_040018.1 (17027028..17060547)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609828.1 (1965982..1990424)

Chromosome VIII - NC_040018.1Genomic Context describing neighboring genes Neighboring gene myomesin 2b Neighboring gene CUB and Sushi multiple domains 1 Neighboring gene uncharacterized LOC113746299 Neighboring gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box helicase 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase chs-2
Names
Chitin synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040018.1 Reference L_crocea_2.0 Primary Assembly

    Range
    17027028..17060547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019254286.2 → XP_019109831.1  chitin synthase chs-2

    UniProtKB/TrEMBL
    A0A6G0J0D3
    Related
    ENSLCRP00005020992.1, ENSLCRT00005021404.1
Nucleotide Protein
Heading Accession and Version

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