U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC104937559 secreted frizzled-related protein 1 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104937559, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC104937559
Gene description
secreted frizzled-related protein 1
Locus tag
EH28_16537
See related
Ensembl:ENSLCRG00005017464
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC104937559 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) III NC_040013.1 (49282219..49294097, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609307.1 (1256645..1268371, complement)

Chromosome III - NC_040013.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113745649 Neighboring gene putative nuclease HARBI1 Neighboring gene golgin subfamily A member 7 Neighboring gene uncharacterized LOC109139451

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
secreted frizzled-related protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040013.1 Reference L_crocea_2.0 Primary Assembly

    Range
    49282219..49294097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010753815.3 → XP_010752117.1  secreted frizzled-related protein 1

    See identical proteins and their annotated locations for XP_010752117.1

    UniProtKB/TrEMBL
    A0A6G0IJ27
    Related
    ENSLCRP00005045795.1, ENSLCRT00005046577.1
    Conserved Domains (2) summary
    cd07443
    Location:45 → 168
    CRD_SFRP1; Cysteine-rich domain of the secreted frizzled-related protein 1 (SFRP1), a regulator of Wnt activity
    cd03580
    Location:177 → 301
    NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases