U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

zbtb44 zinc finger and BTB domain containing 44 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104935661, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
zbtb44
Gene description
zinc finger and BTB domain containing 44
Locus tag
EH28_17167
See related
Ensembl:ENSLCRG00005005558
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: VII
Exon count:
6
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) VII NC_040017.1 (1562111..1578733)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609474.1 (1168358..1183225, complement)

Chromosome VII - NC_040017.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 15 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8 Neighboring gene chromosome VII C11orf53 homolog Neighboring gene POU class 2 homeobox associating factor 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger and BTB domain-containing protein 44
Names
Zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040017.1 Reference L_crocea_2.0 Primary Assembly

    Range
    1562111..1578733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010751530.3 → XP_010749832.1  zinc finger and BTB domain-containing protein 44 isoform X1

    Related
    ENSLCRP00005012671.1, ENSLCRT00005012988.1
    Conserved Domains (7) summary
    smart00225
    Location:32 → 128
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:398 → 462
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:414 → 434
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:502 → 524
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:412 → 434
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 125
    BTB; BTB/POZ domain
    pfam13465
    Location:426 → 451
    zf-H2C2_2; Zinc-finger double domain

  2. XM_010751531.3 → XP_010749833.1  zinc finger and BTB domain-containing protein 44 isoform X2

    Related
    ENSLCRP00005012675.1, ENSLCRT00005012992.1
    Conserved Domains (6) summary
    smart00225
    Location:32 → 128
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:398 → 462
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:414 → 434
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:412 → 434
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 125
    BTB; BTB/POZ domain
    pfam13465
    Location:426 → 451
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.